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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1791999_1792541_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1791999 - 1792541

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGGCTG

5'SS Class:

major

3'SS Sequence:

TCGTGTGTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

GATTTCTCACTC

Flanking Amino Acid:

ILAINYTVAYCCIQRCRRDC

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

57.2

47.1

Major BPS

0.87

0.8

85.6

Major PPT

74.1

0.54

64.9

45.7

Minor 5ss

33.4

-1.9

3.6

43.6

45.1

Minor BPS

49.1

-0

1.8

60.11

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004069

1788873 - 1793242

4370

ENSAPLT00000045822

1782915 - 1792659

9745

ENSAPLT00000035321

1781833 - 1793242

11410

ENSAPLT00000017768

1789039 - 1793242

4204