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Intron Name: Anas_platyrhynchos_platyrhynchos_25_179537_183377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

179537 - 183377

Intron Length:

3841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGCATTCACA

Flanking Amino Acid:

GIWSLNRRHEKPVPHATVPT

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

0.62

1.4

85.7

34.9

Major PPT

78.6

0.64

0.8

69.8

36.6

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

56.9

0.21

2.1

76.36

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012363

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033482

174843 - 192283

17441

ENSAPLT00000020731

174843 - 192283

17441

ENSAPLT00000012879

174843 - 192283

17441