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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1796493_1800264_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1796493 - 1800264

Intron Length:

3772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAG

U12 Branch Point Sequence:

TTTTCCCCAGGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.9

78.8

38.3

Major BPS

63.6

0.34

1.5

63.1

44.4

Major PPT

0.83

0.7

81.4

30.6

Minor 5ss

47.5

-0.2

2.8

64.1

47.4

Minor BPS

-0.3

2.3

67.63

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034057

1796315 - 1802516

6202