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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1800470_1800733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1800470 - 1800733

Intron Length:

264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

AAAGTGTGACCT

Flanking Amino Acid:

GAVKAFFALAGILVEQFVPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.1

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

69.3

0.43

0.9

61.6

Minor 5ss

30.9

-2.2

3.6

45.9

49.3

Minor BPS

38.6

-0.7

2.2

52.61

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004328

1800039 - 1802694

2656

ENSAPLT00000034057

1796315 - 1802516

6202

ENSAPLT00000029355

1800039 - 1802516

2478