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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1800947_1801419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1800947 - 1801419

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATGAC

5'SS Class:

strong_major

3'SS Sequence:

TGAATCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

AAATCCCTAATG

Flanking Amino Acid:

LLLSVALFMEGLLFCFHDYS

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.3

29.2

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

66.5

0.37

1.1

Minor 5ss

26.9

-2.7

3.1

33.8

42.3

Minor BPS

0.11

1.7

61.14

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034057

1796315 - 1802516

6202

ENSAPLT00000029355

1800039 - 1802516

2478

ENSAPLT00000004328

1800039 - 1802694

2656