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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1801605_1802195_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1801605 - 1802195

Intron Length:

591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGGG

5'SS Class:

major

3'SS Sequence:

TGTCTGTGACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TGATGCCTAACA

Flanking Amino Acid:

FLLQGSWLWQIGFVLTPPWG

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.3

67.1

44.6

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

65.4

0.35

1.1

58.6

46.2

Minor 5ss

27.5

-2.6

2.9

32.4

42.2

Minor BPS

54.2

0.13

2.1

70.13

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034057

1796315 - 1802516

6202

ENSAPLT00000029355

1800039 - 1802516

2478

ENSAPLT00000004328

1800039 - 1802694

2656