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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1820732_1821561_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1820732 - 1821561

Intron Length:

830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGCCCT

5'SS Class:

major

3'SS Sequence:

TGACTGTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTCATAAAAC

Flanking Amino Acid:

NSKNKVDENVVIDETLDVKE

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

64.1

41.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

76.6

0.6

41.9

Minor 5ss

35.2

-1.7

3.1

45.9

43.3

Minor BPS

51.9

0.04

2.1

68.75

42.5

Associated Gene:

Gene:

APLP2

Ensembl Gene ID:

ENSAPLG00000004239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023111

1818384 - 1881416

63033

ENSAPLT00000020751

1819156 - 1851441

32286

ENSAPLT00000039782

1818511 - 1842889

24379

ENSAPLT00000020125

1818384 - 1881416

63033

ENSAPLT00000036373

1818384 - 1881552

63169

ENSAPLT00000004414

1819156 - 1854542

35387

ENSAPLT00000030029

1819156 - 1888976

69821