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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1821645_1824178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1821645 - 1824178

Intron Length:

2534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTTCT

5'SS Class:

major

3'SS Sequence:

TCTTTTGGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

GGCTGACTAATG

Flanking Amino Acid:

QPDLYHPMKKGSGMTELDGL

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.2

73.5

38.1

Major BPS

0.47

1.2

69.9

35.3

Major PPT

80.2

0.68

76.3

37.7

Minor 5ss

37.8

-1.4

51.1

45.4

Minor BPS

39.9

-0.9

2.2

42.73

42.3

Associated Gene:

Gene:

APLP2

Ensembl Gene ID:

ENSAPLG00000004239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030029

1819156 - 1888976

69821

ENSAPLT00000020751

1819156 - 1851441

32286

ENSAPLT00000020125

1818384 - 1881416

63033

ENSAPLT00000039782

1818511 - 1842889

24379

ENSAPLT00000004414

1819156 - 1854542

35387

ENSAPLT00000036373

1818384 - 1881552

63169