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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1841660_1888718_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1841660 - 1888718

Intron Length:

47059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTTTTTT

5'SS Class:

weak_major

3'SS Sequence:

TTCTGGGACCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

ACTTCTGGGACC

Flanking Amino Acid:

AARPARQRTKSCFGSKEEIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.37

1.3

73.3

38.2

Major BPS

60.1

0.25

35.6

Major PPT

51.3

0.03

1.2

48.5

43.4

Minor 5ss

47.7

-0.2

2.6

67.9

42.9

Minor BPS

46.5

-0.2

2.1

60.07

39.7

Associated Gene:

Gene:

APLP2

Ensembl Gene ID:

ENSAPLG00000004239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030029

1819156 - 1888976

69821