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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1841789_1880768_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1841789 - 1880768

Intron Length:

38980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGCGA

5'SS Class:

major

3'SS Sequence:

TTCGTGTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

AAAGCAATAAAT

Flanking Amino Acid:

VFSSKQRIYTALAANAGTGF

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

60.9

45.3

Major BPS

65.7

0.39

71.3

30.3

Major PPT

77.4

0.62

0.9

71.4

38.4

Minor 5ss

30.6

-2.2

3.3

39.3

Minor BPS

44.4

-0.3

60.7

41.7

Associated Gene:

Gene:

APLP2

Ensembl Gene ID:

ENSAPLG00000004239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036373

1818384 - 1881552

63169

ENSAPLT00000023111

1818384 - 1881416

63033

ENSAPLT00000020125

1818384 - 1881416

63033