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Intron Name: Anas_platyrhynchos_platyrhynchos_25_190725_190791_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

190725 - 190791

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAA

U12 Branch Point Sequence:

TTGTACAGAGCA

Flanking Amino Acid:

EKQQRNMEYVRYVEALRAEM

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

55.5

0.14

1.1

47.1

37.9

Major PPT

83.4

0.75

0.8

77.6

31.1

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

45.1

-0.3

2.1

62.76

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012363

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033482

174843 - 192283

17441

ENSAPLT00000020731

174843 - 192283

17441

ENSAPLT00000012879

174843 - 192283

17441