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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1941523_1942307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1941523 - 1942307

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAACTTGT

5'SS Class:

major

3'SS Sequence:

TTTCTTGGACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

ATTTCTTGGACT

Flanking Amino Acid:

KEKTQQWKLLGSCQDHEKEL

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.2

71.5

41.1

Major BPS

83.8

0.84

73.6

41.8

Major PPT

67.4

0.39

62.9

Minor 5ss

47.6

-0.2

2.6

64.6

41.8

Minor BPS

70.9

0.74

1.4

86.19

33.2

Associated Gene:

Gene:

NFRKB

Ensembl Gene ID:

ENSAPLG00000005222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005419

1933100 - 1951623

18524

ENSAPLT00000042598

1933100 - 1951623

18524

ENSAPLT00000027822

1938428 - 1951623

13196

ENSAPLT00000023580

1938428 - 1952516

14089