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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1944789_1945267_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1944789 - 1945267

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

GAATTCTGAATT

Flanking Amino Acid:

FLAPDVTSAQVNTVVSGALD

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

72.5

39.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

78.2

0.63

0.9

74.5

39.1

Minor 5ss

41.3

-1

2.8

49.6

Minor BPS

61.6

0.44

1.4

71.76

38.8

Associated Gene:

Gene:

NFRKB

Ensembl Gene ID:

ENSAPLG00000005222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023580

1938428 - 1952516

14089

ENSAPLT00000005419

1933100 - 1951623

18524

ENSAPLT00000042598

1933100 - 1951623

18524

ENSAPLT00000027822

1938428 - 1951623

13196