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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1945392_1945824_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1945392 - 1945824

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TAACCAGTAATT

Flanking Amino Acid:

LHRDRSEEEFERIHQAQAAA

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.4

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

86.8

0.83

0.8

81.4

35.2

Minor 5ss

41.6

-0.9

3.1

53.5

44.6

Minor BPS

47.7

-0.1

2.2

69.11

41.3

Associated Gene:

Gene:

NFRKB

Ensembl Gene ID:

ENSAPLG00000005222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027822

1938428 - 1951623

13196

ENSAPLT00000023580

1938428 - 1952516

14089