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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1945905_1946610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1945905 - 1946610

Intron Length:

706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATTTC

5'SS Class:

strong_major

3'SS Sequence:

GGTTTCTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

AAGGCCTTCATG

Flanking Amino Acid:

QQKPKPPAKMKSSSKESSVK

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

77.3

31.8

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

0.65

0.9

73.7

36.9

Minor 5ss

44.3

-0.6

2.9

57.9

42.1

Minor BPS

47.9

-0.3

1.9

50.39

44.2

Associated Gene:

Gene:

NFRKB

Ensembl Gene ID:

ENSAPLG00000005222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027822

1938428 - 1951623

13196

ENSAPLT00000023580

1938428 - 1952516

14089