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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1946832_1946932_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1946832 - 1946932

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTCC

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTTCTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGGCTTTTATCT

Flanking Amino Acid:

AGSEPAKPSQSVLLVSSPTM

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

68.5

37.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

81.6

0.71

0.7

31.1

Minor 5ss

54.3

0.15

2.3

68.6

42.5

Minor BPS

54.3

0.21

1.6

69.4

41.8

Associated Gene:

Gene:

NFRKB

Ensembl Gene ID:

ENSAPLG00000005222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027822

1938428 - 1951623

13196

ENSAPLT00000023580

1938428 - 1952516

14089

ENSAPLT00000005419

1933100 - 1951623

18524