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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1947207_1948240_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1947207 - 1948240

Intron Length:

1034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TGGTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTTGATGTAATT

Flanking Amino Acid:

TATQTKVLPQVAITGQLGMK

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.5

40.6

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

81.4

0.71

0.9

73.1

42.1

Minor 5ss

35.6

-1.6

3.2

47.4

Minor BPS

49.3

0.03

2.2

76.08

41.4

Associated Gene:

Gene:

NFRKB

Ensembl Gene ID:

ENSAPLG00000005222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027822

1938428 - 1951623

13196