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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1949027_1949744_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1949027 - 1949744

Intron Length:

718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TCAACTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TGTTCTTCAACT

Flanking Amino Acid:

STTVVSTSQAGKLPARITVP

Intron Amino Acid Position:

971

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

78.2

0.7

79.9

32.6

Major PPT

70.7

0.47

0.9

62.3

39.4

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

75.3

0.87

1.4

89.22

35.1

Associated Gene:

Gene:

NFRKB

Ensembl Gene ID:

ENSAPLG00000005222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027822

1938428 - 1951623

13196

ENSAPLT00000023580

1938428 - 1952516

14089

ENSAPLT00000005419

1933100 - 1951623

18524

ENSAPLT00000042598

1933100 - 1951623

18524