Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_1975983_1976525_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1975983 - 1976525

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

AAACTCCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

AACTCTTTAAAC

Flanking Amino Acid:

TMLAKKVKSTVEEIYRSHPD

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.9

36.6

Major BPS

0.7

0.9

79.6

29.1

Major PPT

67.6

0.4

0.9

63.5

38.2

Minor 5ss

33.6

-1.9

3.5

49.7

46.1

Minor BPS

65.7

0.47

1.4

67.19

38.1

Associated Gene:

Gene:

ST14

Ensembl Gene ID:

ENSAPLG00000005480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019724

1966424 - 1986258

19835

ENSAPLT00000005711

1966424 - 1986784

20361