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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1978397_1978630_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1978397 - 1978630

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

AGCTGTCTAATA

Flanking Amino Acid:

LSPVEPHALVRLCGNYAPSY

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

79.3

0.66

0.7

72.7

32.1

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

45.6

-0.3

54.6

38.7

Associated Gene:

Gene:

ST14

Ensembl Gene ID:

ENSAPLG00000005480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019724

1966424 - 1986258

19835

ENSAPLT00000005711

1966424 - 1986784

20361