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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1983328_1983708_F


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1983328 - 1983708

Intron Length:
381

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCA|GTGAGTACC

5'SS Class:
major

3'SS Sequence:
TTCCTCACCCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAA

U12 Branch Point Sequence:
CCTTCCTCACCC

Flanking Amino Acid:
CEDNSDEDNCNCGIRSFTRK

Intron Amino Acid Position:
590

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.8
0.54
1
69
35.7

Major BPS
79.5
0.73
0.9
70
36.9

Major PPT
74.6
0.55
0.8
66.4
34.3

Minor 5ss
33.7
-1.9
2.7
43.9
37

Minor BPS
55.4
0.15
1.9
66.23
45.6

Associated Gene:

Gene:
ST14

Ensembl Gene ID:

Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1966424 - 1986258
19835

1966424 - 1986784
20361