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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1988800_1989348_R

Intron Information:

Intron Rank:

148636

Intron Class:

major

Intron Phase:

Intron Coordinates:

1988800 - 1989348

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

AGATATTAAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.3

34.5

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

85.5

0.8

0.7

81.4

30.6

Minor 5ss

28.3

-2.5

3.5

37.3

47.4

Minor BPS

45.6

-0.3

1.8

53.84

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045648

1988470 - 2010759

22290