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Intron Name: Anas_platyrhynchos_platyrhynchos_25_1989469_2004827_R

Intron Information:

Intron Rank:

148642

Intron Class:

major

Intron Phase:

Intron Coordinates:

1989469 - 2004827

Intron Length:

15359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGGA

5'SS Class:

major

3'SS Sequence:

CTTTCTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACCTAT

U12 Branch Point Sequence:

TTTTCTGTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

42.4

Major BPS

0.27

1.3

58.7

39.9

Major PPT

84.4

0.77

0.8

76.5

37.6

Minor 5ss

27.2

-2.6

3.6

37.6

47.2

Minor BPS

60.1

0.4

2.3

87.23

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047486

1986805 - 2004896

18092