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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2004935_2010680_R

Intron Information:

Intron Rank:

148633

Intron Class:

major

Intron Phase:

Intron Coordinates:

2004935 - 2010680

Intron Length:

5746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

GAGAAAATAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

87.9

29.3

Major BPS

61.3

0.28

30.6

Major PPT

82.9

0.74

0.8

77.3

31.5

Minor 5ss

49.8

-0

2.8

73.2

43.7

Minor BPS

42.1

-0.6

1.9

50.16

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032953

2004917 - 2011098

6182