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Intron Name: Anas_platyrhynchos_platyrhynchos_25_202002_202219_F


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
202002 - 202219

Intron Length:
218

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTACGTACG

5'SS Class:
major

3'SS Sequence:
TGTGTTGTTGTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTCAC

U12 Branch Point Sequence:
TGCACCCTACTT

Flanking Amino Acid:
GWCGYMARKRGSSVQLTESV

Intron Amino Acid Position:
495

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.3
0.62
1.1
66.5
44.9

Major BPS
76.2
0.65
0.9
77.4
26.5

Major PPT
74.9
0.56
1
69.5
41.6

Minor 5ss
34.5
-1.8
2.8
34.9
41

Minor BPS
47.5
-0.1
2
66.06
44.6

Associated Gene:

Gene:
SLC37A2

Ensembl Gene ID:

Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

195217 - 202791
7575