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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2080733_2080842_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2080733 - 2080842

Intron Length:
110

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAGGTGT

5'SS Class:
strong_major

3'SS Sequence:
CTCTCTTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTGAC

U12 Branch Point Sequence:
CGTGCCCTGACT

Flanking Amino Acid:
RSEFKVFEAKVIDGTLCGPE

Intron Amino Acid Position:
423

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80
0.71
1
73.2
38.6

Major BPS
56.5
0.16
1.1
48.6
36.6

Major PPT
79.8
0.67
0.7
72.4
32.3

Minor 5ss
40.2
-1.1
3.4
55.7
43.1

Minor BPS
55
0.24
1.9
72.78
44.1

Associated Gene:

Gene:
ADAMTS8

Ensembl Gene ID:

Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2074669 - 2084592
9924