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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2106256_2108989_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2106256 - 2108989

Intron Length:

2734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAACAGCA

5'SS Class:

weak_major

3'SS Sequence:

GCTGTCACTGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

ATTGCTGTCACT

Flanking Amino Acid:

SPVLNLDVRWPHGRMLGIKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.02

1.4

50.9

40.5

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

59.2

0.21

1.1

57.6

37.6

Minor 5ss

38.1

-1.3

3.4

52.8

44.2

Minor BPS

47.1

-0.1

2.4

73.4

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006594

2105969 - 2114329

8361