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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2111427_2112060_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2111427 - 2112060

Intron Length:

634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCAGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

ATTTCTTCCAGT

Flanking Amino Acid:

SCNLDPCSSAGKSFREEQCE

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

65.4

0.35

1.1

57.9

42.2

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

48.4

-0

2.2

74.15

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006594

2105969 - 2114329

8361