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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2304885_2314127_F

Intron Information:

Intron Rank:

138506

Intron Class:

major

Intron Phase:

Intron Coordinates:

2304885 - 2314127

Intron Length:

9243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

GTTATCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TTCTCCGTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

70.5

41.3

Major BPS

72.5

0.56

1.2

63.4

Major PPT

84.3

0.77

0.8

81.2

36.4

Minor 5ss

30.6

-2.2

2.9

38.2

41.8

Minor BPS

0.08

2.2

68.4

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045925

2304814 - 2342974

38161