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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2349186_2535085_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2349186 - 2535085

Intron Length:

185900

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

CTTGTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAG

U12 Branch Point Sequence:

TCTGTCTCAGGC

Flanking Amino Acid:

AGMAALLLSQGVPVRSGDAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

53.2

0.08

1.7

65.3

43.7

Major PPT

72.3

0.5

0.9

65.6

36.1

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

43.1

-0.5

53.43

44.7

Associated Gene:

Gene:

NTM

Ensembl Gene ID:

ENSAPLG00000003740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003889

2349110 - 2670660

321551