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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2535171_2615973_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2535171 - 2615973

Intron Length:

80803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TGCCTCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTAAC

U12 Branch Point Sequence:

AGCACGCTAACA

Flanking Amino Acid:

TVRQGESATLRCSVDNRVTR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.2

36.8

Major BPS

57.1

0.18

1.1

Major PPT

68.6

0.42

60.8

40.2

Minor 5ss

30.3

-2.3

3.5

Minor BPS

44.4

-0.4

2.3

56.18

42.4

Associated Gene:

Gene:

NTM

Ensembl Gene ID:

ENSAPLG00000003740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048465

2535004 - 2670660

135657

ENSAPLT00000003889

2349110 - 2670660

321551