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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2616207_2638716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2616207 - 2638716

Intron Length:

22510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGCATTTTCATT

Flanking Amino Acid:

KTSRVHLIVQVSPKITEISS

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

100

1.24

0.5

100

Major PPT

80.1

0.68

0.9

73.8

36.9

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

48.2

-0

1.7

64.1

41.3

Associated Gene:

Gene:

NTM

Ensembl Gene ID:

ENSAPLG00000003740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048465

2535004 - 2670660

135657

ENSAPLT00000003889

2349110 - 2670660

321551