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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2638891_2665320_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2638891 - 2665320

Intron Length:

26430

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCTGGGAGC

5'SS Class:

major

3'SS Sequence:

AAAAAGGGGTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAAAAAA

U12 Branch Point Sequence:

CCTCCTTGAACA

Flanking Amino Acid:

PRIFQEGHGEEERGGRHRPP

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.4

60.5

41.2

Major BPS

47.9

-0.1

0.9

51.7

28.4

Major PPT

36.3

-0.7

1.6

24.4

41.4

Minor 5ss

16.8

-3.8

3.6

17.6

28.9

Minor BPS

59.5

0.29

1.5

65.35

41.2

Associated Gene:

Gene:

NTM

Ensembl Gene ID:

ENSAPLG00000003740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003889

2349110 - 2670660

321551

ENSAPLT00000048465

2535004 - 2670660

135657