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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2665490_2666135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2665490 - 2666135

Intron Length:

646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

ATCCCCATCACC

Flanking Amino Acid:

ADFQWYKDDKRLAEGQKGLK

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

67.3

36.7

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

74.4

0.55

0.8

65.2

36.2

Minor 5ss

32.2

-2

3.4

43.3

Minor BPS

48.8

-0.1

63.3

41.9

Associated Gene:

Gene:

NTM

Ensembl Gene ID:

ENSAPLG00000003740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048465

2535004 - 2670660

135657

ENSAPLT00000003889

2349110 - 2670660

321551