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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2666288_2670559_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2666288 - 2670559

Intron Length:

4272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

CGCCCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAACAC

U12 Branch Point Sequence:

CGGTGGCTAACA

Flanking Amino Acid:

GNTNASMILYGPGAVHDGNN

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.4

44.7

Major BPS

49.5

-0

1.1

58.7

36.3

Major PPT

72.2

0.5

0.8

65.1

30.6

Minor 5ss

30.8

-2.2

3.3

38.2

46.7

Minor BPS

40.5

-0.7

2.5

52.23

45.6

Associated Gene:

Gene:

NTM

Ensembl Gene ID:

ENSAPLG00000003740

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048465

2535004 - 2670660

135657