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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2677565_2677899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2677565 - 2677899

Intron Length:

335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGGGGG

5'SS Class:

major

3'SS Sequence:

CCACTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

CCGTCCACCACT

Flanking Amino Acid:

AEFQWFKEDTRLANGLEGVR

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

44.1

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

72.6

0.51

0.8

65.6

30.1

Minor 5ss

22.1

-3.2

3.4

28.8

43.7

Minor BPS

44.2

-0.3

2.2

60.63

48.6

Associated Gene:

Gene:

OPCML

Ensembl Gene ID:

ENSAPLG00000004450

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034189

2676560 - 2964161

287602

ENSAPLT00000004587

2676560 - 2693903

17344

ENSAPLT00000042010

2676560 - 2916924

240365

ENSAPLT00000034726

2676560 - 2707475

30916