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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2678021_2678116_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2678021 - 2678116

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

GGTGTCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATGAC

U12 Branch Point Sequence:

AGGGGCATGACG

Flanking Amino Acid:

DVRKVKVTVNYPPYISNAKN

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

63.9

Major BPS

47.8

-0.1

1.3

39.4

40.4

Major PPT

0.47

62.7

39.7

Minor 5ss

35.9

-1.6

3.3

53.5

43.7

Minor BPS

40.9

-0.8

2.1

42.21

42.8

Associated Gene:

Gene:

OPCML

Ensembl Gene ID:

ENSAPLG00000004450

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034099

2676560 - 2693903

17344

ENSAPLT00000033259

2676560 - 2772372

95813

ENSAPLT00000042010

2676560 - 2916924

240365

ENSAPLT00000004587

2676560 - 2693903

17344

ENSAPLT00000034726

2676560 - 2707475

30916

ENSAPLT00000034189

2676560 - 2964161

287602