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Intron Name: Anas_platyrhynchos_platyrhynchos_25_2693716_2772205_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2693716 - 2772205

Intron Length:

78490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

GGCTGGTGACCC

Flanking Amino Acid:

TVRQGESATLRCTVDDRVTR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.2

36.8

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

84.8

0.78

0.7

80.2

Minor 5ss

30.3

-2.3

3.5

Minor BPS

36.2

-1

2.4

44.25

43.5

Associated Gene:

Gene:

OPCML

Ensembl Gene ID:

ENSAPLG00000004450

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034189

2676560 - 2964161

287602

ENSAPLT00000033259

2676560 - 2772372

95813

ENSAPLT00000042010

2676560 - 2916924

240365