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Intron Name: Anas_platyrhynchos_platyrhynchos_25_296783_296856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

296783 - 296856

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCCA

5'SS Class:

major

3'SS Sequence:

CTCTCTTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

GTTGCGGCACCC

Flanking Amino Acid:

GAGSGSPAVPGGALYQPVTM

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

63.2

42.9

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

80.6

0.69

0.7

76.1

25.9

Minor 5ss

29.6

-2.3

3.4

39.1

46.2

Minor BPS

34.8

-1.1

2.7

50.68

46.1

Associated Gene:

Gene:

PKNOX2

Ensembl Gene ID:

ENSAPLG00000013813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014416

281705 - 304546

22842