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Intron Name: Anas_platyrhynchos_platyrhynchos_25_298759_300951_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

298759 - 300951

Intron Length:

2193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGCATC

5'SS Class:

major

3'SS Sequence:

CTCTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGCCAT

U12 Branch Point Sequence:

TGCTGCCCATCT

Flanking Amino Acid:

MRSWLFQHLMHPYPTEDEKR

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

0.9

36.6

Major BPS

53.4

0.08

1.4

64.2

Major PPT

90.4

0.91

0.6

83.6

31.4

Minor 5ss

38.6

-1.3

48.9

41.6

Minor BPS

40.9

-0.6

2.3

61.66

47.6

Associated Gene:

Gene:

PKNOX2

Ensembl Gene ID:

ENSAPLG00000013813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014416

281705 - 304546

22842