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Intron Name: Anas_platyrhynchos_platyrhynchos_25_301029_301498_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

301029 - 301498

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCATA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTGGGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTTACTTTAATG

Flanking Amino Acid:

TNLTLLQVNNWFINARRRIL

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

75.8

35.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

52.1

0.05

1.2

54.6

39.4

Minor 5ss

37.7

-1.4

45.4

43.9

Minor BPS

0.43

1.4

67.54

40.8

Associated Gene:

Gene:

PKNOX2

Ensembl Gene ID:

ENSAPLG00000013813

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014416

281705 - 304546

22842