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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3041225_3041567_R

Intron Information:

Intron Rank:

129145

Intron Class:

major

Intron Phase:

Intron Coordinates:

3041225 - 3041567

Intron Length:

343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACGTTC

5'SS Class:

major

3'SS Sequence:

TTCCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

AATCTTTTGAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

37.3

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

91.4

0.93

0.6

87.5

22.7

Minor 5ss

41.4

-1

3.3

58.3

46.6

Minor BPS

-0

1.6

57.99

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028972

3036951 - 3041753

4803