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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3045020_3052051_R

Intron Information:

Intron Rank:

129616

Intron Class:

major

Intron Phase:

Intron Coordinates:

3045020 - 3052051

Intron Length:

7032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TTTTCCTTTCTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

88.1

0.86

0.6

81.5

30.4

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

47.4

-0.2

3.6

79.05

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034929

3044360 - 3052509

8150