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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3057628_3059211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3057628 - 3059211

Intron Length:

1584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

PSNVAGVSSTDVFPQPDLTD

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

76.9

38.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.4

0.77

0.8

77.5

36.5

Minor 5ss

30.9

-2.2

3.6

46.8

48.5

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

IGSF9B

Ensembl Gene ID:

ENSAPLG00000010409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010849

3053687 - 3083452

29766