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Intron Name: Anas_platyrhynchos_platyrhynchos_25_306052_307019_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
306052 - 307019

Intron Length:
968

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACCTGCT

5'SS Class:
major

3'SS Sequence:
TCTCTCTTTGCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTGGCAA

U12 Branch Point Sequence:
GCACTGGCAAAC

Flanking Amino Acid:
PTLLTDYILKVLCPT*

Intron Amino Acid Position:
385

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.2
0.55
1.2
69.9
40.9

Major BPS
45.4
-0.2
1.4
52.7
43.2

Major PPT
88.8
0.87
0.6
84
23.9

Minor 5ss
39.8
-1.1
3.4
59.5
44.9

Minor BPS
30.8
-1.4
2.3
34.4
34.1

Associated Gene:

Gene:
FEZ1

Ensembl Gene ID:

Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

305878 - 318070
12193