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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3060722_3061786_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3060722 - 3061786

Intron Length:

1065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTCACATAT

5'SS Class:

weak_major

3'SS Sequence:

CTCGGGTGGCGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TGACCCTGAGCC

Flanking Amino Acid:

LVLSRELAGQCVSATSMHIA

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.4

61.3

40.1

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

42.6

-0.4

1.7

37.4

44.3

Minor 5ss

40.7

-1

53.6

44.6

Minor BPS

51.8

0.04

1.7

63.35

41.1

Associated Gene:

Gene:

IGSF9B

Ensembl Gene ID:

ENSAPLG00000010409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010849

3053687 - 3083452

29766