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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3076245_3077403_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3076245 - 3077403

Intron Length:

1159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCAAA

U12 Branch Point Sequence:

GTGCTCCAAAGT

Flanking Amino Acid:

ELLAASSKYQVSDGSLTVLS

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

50.3

0.01

1.2

60.3

34.2

Major PPT

73.8

0.54

0.8

65.2

36.3

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

41.6

-0.5

2.1

58.19

44.6

Associated Gene:

Gene:

IGSF9B

Ensembl Gene ID:

ENSAPLG00000010409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010849

3053687 - 3083452

29766