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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3077556_3079793_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3077556 - 3079793

Intron Length:

2238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

GAGGGTGTGACG

Flanking Amino Acid:

NGSWVHLTVNAPPTFTETPP

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

71.8

39.7

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

71.1

0.48

0.8

61.7

Minor 5ss

31.9

-2.1

2.9

43.6

43.3

Minor BPS

36.2

-1.2

2.2

34.89

40.6

Associated Gene:

Gene:

IGSF9B

Ensembl Gene ID:

ENSAPLG00000010409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010849

3053687 - 3083452

29766