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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3147879_3148302_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3147879 - 3148302

Intron Length:

424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATGCCC

5'SS Class:

major

3'SS Sequence:

TCCTCCTCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TCCTCCTCACCA

Flanking Amino Acid:

YSLNPTTGTLVFHAVHKGDT

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

41.2

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

73.2

0.52

0.9

66.4

34.4

Minor 5ss

32.2

-2

3.3

40.3

39.7

Minor BPS

0.19

1.9

67.11

45.4

Associated Gene:

Gene:

JAM3

Ensembl Gene ID:

ENSAPLG00000018535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027488

3145293 - 3154231

8939