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Intron Name: Anas_platyrhynchos_platyrhynchos_25_3155987_3158798_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3155987 - 3158798

Intron Length:

2812

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TGTGTCACAAGC

Flanking Amino Acid:

VVGRAISTPEQTINELTFGA

Intron Amino Acid Position:

1686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

81.4

32.7

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

97.3

1.06

0.5

96.6

11.5

Minor 5ss

37.4

-1.4

2.7

Minor BPS

-0.5

2.1

55.77

42.5

Associated Gene:

Gene:

NCAPD3

Ensembl Gene ID:

ENSAPLG00000010868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011386

3155542 - 3184261

28720